Dashboard
Column
Screened (Target): 1241 (1500)
Enrolled (Target): 479 (609)
Average screened per month
130Average enrolled per month
52Column
Study Flow & Monthly Cascade (Cumulative Numbers), Updated on 2023-05-02
Daily trend of screening and enrollment
Monthly trend of screening and enrollment
Column
Follow-up status at enroll and follow-up visits (Cumulative Numbers)
Follow-up status by number of visits (Head count)
% of number of visits at each follow-up month
Study Data
Column
Characteristics
| HPV Result | ||
|---|---|---|---|
Characteristic | Total N = 11951 | Positive 509 (42.6)1 | Negative 686 (57.4)1 |
Study Strata | |||
FSW <30 HIV- | 442 (42.0) | 199 (44.9) | 243 (39.9) |
FSW <30 HIV+ | 33 (3.1) | 17 (3.8) | 16 (2.6) |
FSW 30+ HIV- | 433 (41.2) | 158 (35.7) | 275 (45.2) |
FSW 30+ HIV+ | 104 (9.9) | 52 (11.7) | 52 (8.5) |
MSM <30 HIV- | 25 (2.4) | 6 (1.4) | 19 (3.1) |
MSM <30 HIV+ | 8 (0.8) | 8 (1.8) | 0 (0.0) |
MSM 30+ HIV- | 4 (0.4) | 0 (0.0) | 4 (0.7) |
MSM 30+ HIV+ | 3 (0.3) | 3 (0.7) | 0 (0.0) |
Missing | 143 | 66 | 77 |
Age category | |||
<30 | 521 (48.6) | 238 (52.5) | 283 (45.7) |
30+ | 551 (51.4) | 215 (47.5) | 336 (54.3) |
Missing | 123 | 56 | 67 |
Gender Category | |||
FSW | 1,143 (96.1) | 486 (96.2) | 657 (96.1) |
MSM | 46 (3.9) | 19 (3.8) | 27 (3.9) |
Missing | 6 | 4 | 2 |
HIV Status | |||
Negative | 1,012 (86.1) | 410 (82.0) | 602 (89.2) |
Positive | 163 (13.9) | 90 (18.0) | 73 (10.8) |
Missing | 20 | 9 | 11 |
1n (%) | |||
GeneXpert Results
Column
LTFU by months & visits
Missing AGE
Missing SEX
Missing HIV Status
R Session Info
R version 4.2.2 (2022-10-31)
Platform: aarch64-apple-darwin20 (64-bit)
Running under: macOS Ventura 13.3.1
Matrix products: default
BLAS: /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/lib/libRblas.0.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/lib/libRlapack.dylib
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] flexdashboard_0.6.1 glue_1.6.2 sjlabelled_1.2.0
[4] gtsummary_1.7.0 lubridate_1.9.2 forcats_1.0.0
[7] stringr_1.5.0 dplyr_1.1.1 purrr_1.0.1
[10] readr_2.1.4 tidyr_1.3.0 tibble_3.2.1
[13] ggplot2_3.4.1.9000 tidyverse_1.3.2
loaded via a namespace (and not attached):
[1] fs_1.6.1 insight_0.19.0 httr_1.4.4
[4] tools_4.2.2 backports_1.4.1 bslib_0.4.2
[7] DT_0.27 utf8_1.2.3 R6_2.5.1
[10] DBI_1.1.3 lazyeval_0.2.2 colorspace_2.1-0
[13] withr_2.5.0 tidyselect_1.2.0 curl_5.0.0
[16] compiler_4.2.2 cli_3.6.1 rvest_1.0.3
[19] gt_0.8.0 flextable_0.8.5 xml2_1.3.3
[22] officer_0.5.2 plotly_4.10.1 labeling_0.4.2
[25] sass_0.4.5 scales_1.2.1 askpass_1.1
[28] systemfonts_1.0.4 commonmark_1.8.1 digest_0.6.31
[31] foreign_0.8-84 rmarkdown_2.20 gfonts_0.2.0
[34] rio_0.5.29 base64enc_0.1-3 pkgconfig_2.0.3
[37] htmltools_0.5.5 dbplyr_2.3.0 fastmap_1.1.1
[40] highr_0.10 htmlwidgets_1.6.1 rlang_1.1.0.9000
[43] readxl_1.4.2 httpcode_0.3.0 rstudioapi_0.14
[46] shiny_1.7.4 jquerylib_0.1.4 farver_2.1.1
[49] generics_0.1.3 jsonlite_1.8.4 crosstalk_1.2.0
[52] zip_2.2.2 googlesheets4_1.0.1 magrittr_2.0.3
[55] Rcpp_1.0.10 munsell_0.5.0 fansi_1.0.4
[58] gdtools_0.3.0 lifecycle_1.0.3 stringi_1.7.12
[61] yaml_2.3.7 snakecase_0.11.0 grid_4.2.2
[64] promises_1.2.0.1 crayon_1.5.2 haven_2.5.1
[67] hms_1.1.2 knitr_1.42 pillar_1.9.0
[70] uuid_1.1-0 crul_1.3 reprex_2.0.2
[73] evaluate_0.20 data.table_1.14.6 broom.helpers_1.11.0
[76] modelr_0.1.10 ggprism_1.0.4 httpuv_1.6.9
[79] vctrs_0.6.1 tzdb_0.3.0 cellranger_1.1.0
[82] openssl_2.0.5 gtable_0.3.3 assertthat_0.2.1
[85] cachem_1.0.7 openxlsx_4.2.5.1 xfun_0.37
[88] mime_0.12 janitor_2.2.0 xtable_1.8-4
[91] broom_1.0.4 later_1.3.0 googledrive_2.0.0
[94] viridisLite_0.4.1 gargle_1.3.0 memoise_2.0.1
[97] timechange_0.2.0 ellipsis_0.3.2 package * version date (UTC) lib source
askpass 1.1 2019-01-13 [1] CRAN (R 4.2.0)
assertthat 0.2.1 2019-03-21 [1] CRAN (R 4.2.0)
backports 1.4.1 2021-12-13 [1] CRAN (R 4.2.0)
base64enc 0.1-3 2015-07-28 [1] CRAN (R 4.2.0)
broom 1.0.4 2023-03-11 [1] CRAN (R 4.2.0)
broom.helpers 1.11.0 2023-01-06 [1] CRAN (R 4.2.0)
bslib 0.4.2 2022-12-16 [1] CRAN (R 4.2.0)
cachem 1.0.7 2023-02-24 [1] CRAN (R 4.2.0)
cellranger 1.1.0 2016-07-27 [1] CRAN (R 4.2.0)
cli 3.6.1 2023-03-23 [1] CRAN (R 4.2.2)
colorspace 2.1-0 2023-01-23 [1] CRAN (R 4.2.0)
commonmark 1.8.1 2022-10-14 [1] CRAN (R 4.2.0)
crayon 1.5.2 2022-09-29 [1] CRAN (R 4.2.0)
crosstalk 1.2.0 2021-11-04 [1] CRAN (R 4.2.0)
crul 1.3 2022-09-03 [1] CRAN (R 4.2.0)
curl 5.0.0 2023-01-12 [1] CRAN (R 4.2.0)
data.table 1.14.6 2022-11-16 [1] CRAN (R 4.2.2)
DBI 1.1.3 2022-06-18 [1] CRAN (R 4.2.0)
dbplyr 2.3.0 2023-01-16 [1] CRAN (R 4.2.0)
digest 0.6.31 2022-12-11 [1] CRAN (R 4.2.0)
dplyr * 1.1.1 2023-03-22 [1] CRAN (R 4.2.0)
DT 0.27 2023-01-17 [1] CRAN (R 4.2.0)
ellipsis 0.3.2 2021-04-29 [1] CRAN (R 4.2.0)
evaluate 0.20 2023-01-17 [1] CRAN (R 4.2.0)
fansi 1.0.4 2023-01-22 [1] CRAN (R 4.2.0)
farver 2.1.1 2022-07-06 [1] CRAN (R 4.2.0)
fastmap 1.1.1 2023-02-24 [1] CRAN (R 4.2.0)
flexdashboard * 0.6.1 2023-01-23 [1] CRAN (R 4.2.0)
flextable 0.8.5 2023-01-29 [1] CRAN (R 4.2.0)
forcats * 1.0.0 2023-01-29 [1] CRAN (R 4.2.0)
foreign 0.8-84 2022-12-06 [1] CRAN (R 4.2.0)
fs 1.6.1 2023-02-06 [1] CRAN (R 4.2.0)
gargle 1.3.0 2023-01-30 [1] CRAN (R 4.2.0)
gdtools 0.3.0 2023-01-15 [1] CRAN (R 4.2.0)
generics 0.1.3 2022-07-05 [1] CRAN (R 4.2.0)
gfonts 0.2.0 2023-01-08 [1] CRAN (R 4.2.0)
ggplot2 * 3.4.1.9000 2023-03-23 [1] Github (tidyverse/ggplot2@1d1f795)
ggprism 1.0.4 2022-11-04 [1] CRAN (R 4.2.1)
glue * 1.6.2 2022-02-24 [1] CRAN (R 4.2.0)
googledrive 2.0.0 2021-07-08 [1] CRAN (R 4.2.0)
googlesheets4 1.0.1 2022-08-13 [1] CRAN (R 4.2.0)
gt 0.8.0 2022-11-16 [1] CRAN (R 4.2.2)
gtable 0.3.3 2023-03-21 [1] CRAN (R 4.2.0)
gtsummary * 1.7.0 2023-01-13 [1] CRAN (R 4.2.0)
haven 2.5.1 2022-08-22 [1] CRAN (R 4.2.0)
highr 0.10 2022-12-22 [1] CRAN (R 4.2.0)
hms 1.1.2 2022-08-19 [1] CRAN (R 4.2.0)
htmltools 0.5.5 2023-03-23 [1] CRAN (R 4.2.2)
htmlwidgets 1.6.1 2023-01-07 [1] CRAN (R 4.2.0)
httpcode 0.3.0 2020-04-10 [1] CRAN (R 4.2.0)
httpuv 1.6.9 2023-02-14 [1] CRAN (R 4.2.0)
httr 1.4.4 2022-08-17 [1] CRAN (R 4.2.0)
insight 0.19.0 2023-01-30 [1] CRAN (R 4.2.0)
janitor 2.2.0 2023-02-02 [1] CRAN (R 4.2.2)
jquerylib 0.1.4 2021-04-26 [1] CRAN (R 4.2.0)
jsonlite 1.8.4 2022-12-06 [1] CRAN (R 4.2.0)
knitr 1.42 2023-01-25 [1] CRAN (R 4.2.0)
labeling 0.4.2 2020-10-20 [1] CRAN (R 4.2.0)
later 1.3.0 2021-08-18 [1] CRAN (R 4.2.0)
lazyeval 0.2.2 2019-03-15 [1] CRAN (R 4.2.0)
lifecycle 1.0.3 2022-10-07 [1] CRAN (R 4.2.0)
lubridate * 1.9.2 2023-02-10 [1] CRAN (R 4.2.0)
magrittr 2.0.3 2022-03-30 [1] CRAN (R 4.2.0)
memoise 2.0.1 2021-11-26 [1] CRAN (R 4.2.0)
mime 0.12 2021-09-28 [1] CRAN (R 4.2.0)
modelr 0.1.10 2022-11-11 [1] CRAN (R 4.2.0)
munsell 0.5.0 2018-06-12 [1] CRAN (R 4.2.0)
officer 0.5.2 2023-01-27 [1] CRAN (R 4.2.0)
openssl 2.0.5 2022-12-06 [1] CRAN (R 4.2.0)
openxlsx 4.2.5.1 2022-10-24 [1] CRAN (R 4.2.0)
pillar 1.9.0 2023-03-22 [1] CRAN (R 4.2.0)
pkgconfig 2.0.3 2019-09-22 [1] CRAN (R 4.2.0)
plotly 4.10.1 2022-11-07 [1] CRAN (R 4.2.0)
promises 1.2.0.1 2021-02-11 [1] CRAN (R 4.2.0)
purrr * 1.0.1 2023-01-10 [1] CRAN (R 4.2.0)
R6 2.5.1 2021-08-19 [1] CRAN (R 4.2.0)
Rcpp 1.0.10 2023-01-22 [1] CRAN (R 4.2.0)
readr * 2.1.4 2023-02-10 [1] CRAN (R 4.2.0)
readxl 1.4.2 2023-02-09 [1] CRAN (R 4.2.0)
reprex 2.0.2 2022-08-17 [1] CRAN (R 4.2.0)
rio 0.5.29 2021-11-22 [1] CRAN (R 4.2.0)
rlang 1.1.0.9000 2023-03-23 [1] Github (tidyverse/rlang@ea2fe5f)
rmarkdown 2.20 2023-01-19 [1] CRAN (R 4.2.0)
rstudioapi 0.14 2022-08-22 [1] CRAN (R 4.2.0)
rvest 1.0.3 2022-08-19 [1] CRAN (R 4.2.0)
sass 0.4.5 2023-01-24 [1] CRAN (R 4.2.0)
scales 1.2.1 2022-08-20 [1] CRAN (R 4.2.0)
sessioninfo 1.2.2 2021-12-06 [1] CRAN (R 4.2.0)
shiny 1.7.4 2022-12-15 [1] CRAN (R 4.2.2)
sjlabelled * 1.2.0 2022-04-10 [1] CRAN (R 4.2.0)
snakecase 0.11.0 2019-05-25 [1] CRAN (R 4.2.0)
stringi 1.7.12 2023-01-11 [1] CRAN (R 4.2.0)
stringr * 1.5.0 2022-12-02 [1] CRAN (R 4.2.2)
systemfonts 1.0.4 2022-02-11 [1] CRAN (R 4.2.0)
tibble * 3.2.1 2023-03-20 [1] CRAN (R 4.2.0)
tidyr * 1.3.0 2023-01-24 [1] CRAN (R 4.2.0)
tidyselect 1.2.0 2022-10-10 [1] CRAN (R 4.2.0)
tidyverse * 1.3.2 2022-07-18 [1] CRAN (R 4.2.0)
timechange 0.2.0 2023-01-11 [1] CRAN (R 4.2.0)
tzdb 0.3.0 2022-03-28 [1] CRAN (R 4.2.0)
utf8 1.2.3 2023-01-31 [1] CRAN (R 4.2.0)
uuid 1.1-0 2022-04-19 [1] CRAN (R 4.2.0)
vctrs 0.6.1 2023-03-22 [1] CRAN (R 4.2.0)
viridisLite 0.4.1 2022-08-22 [1] CRAN (R 4.2.0)
withr 2.5.0 2022-03-03 [1] CRAN (R 4.2.0)
xfun 0.37 2023-01-31 [1] CRAN (R 4.2.0)
xml2 1.3.3 2021-11-30 [1] CRAN (R 4.2.0)
xtable 1.8-4 2019-04-21 [1] CRAN (R 4.2.0)
yaml 2.3.7 2023-01-23 [1] CRAN (R 4.2.0)
zip 2.2.2 2022-10-26 [1] CRAN (R 4.2.0)
[1] /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library